I guess other people have already pointed this out but yes, it does matter. The adapter board doesn't carry the pins that aren't needed (which I think is just EXT0..EXT3, which are just grounded on the main board) - so if you flip the adapter around you'd lose 4 bits of the PPU address/data bus (AD1-4), looks like. I don't quite know how that causes the kind of result you saw, but there you go...daskrabs wrote:2. I accidentally mounted the adapter board upside down, but that shouldn't matter, should it? Doesn't it just shift the pins?
Hopefully this will sort out your problem. I guess the shot in the dark was worth it after all.

(IIRC there was also a gametech.us video in which he considered reversing the adapter board for an install, but couldn't because the adapter isn't symmetrical. Just one of many little tidbits of info on which I fed to pass time while waiting for NESRGB boards to come back in stock...)